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The CIPRES Science Gateway V. 3.3

Posted by Marcus Zillman

The CIPRES Science Gateway V. 3.3

The CIPRES Science Gateway V. 3.3 is a public resource for inference of large phylogenetic trees. It is designed to provide all researchers with access to NSF XSEDE’s large computational resources through a simple browser interface. You can now also access these same capabilities programatically with the CIPRES REST API. High Performance Parallel Codes for Large Tree Inference and Sequence Alignment on XSEDE:RAxML; MrBayes; BEAST; BEAST2; GARLI; MAFFT; DPPDIV; FastTree, jModelTest2, and Migrate-N. If you need access to PhyloBayes, please inquire. Serial Codes for Tree Inference: PAUP* (Inference by Parsimony); Poy (Alignment and Inference); Serial Codes for Sequence Alignment: ClustalW; Contralign; MUSCLE; PROBCONS; PROBALIGN. This will be added to Biological Informatics Subject Tracer™.

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